I have written extensive JavaDoc documentation on my application, and added lots of useful info at overview.html and package.html files (including links on the former to illustrations in doc-files/). Maven's Javadoc plugin nicely uses the standard javadoc tool to generate the classic JavaDoc frameset, but now I need to generate a PDF with the whole documentation.
AurigaDoclet generates very pretty PDFs, and I was able to make DocFlex work also. However, both ignore my overview.html and package.html files (tried both inside and outside Maven - the PDF will be a once-only thing, since I'd rather have the HTMLs on the long run).
Does anyone know how to make AurigaDoclet recoginze my non-Java files? Or, alternatively, another to generate a decent-looking PDF from either the source code or the JavaDoc-generated HTML?
Nailed it. After trying all the possible tools to generate straight from the source, I returned to HTMLDOC. It is not JavaDoc-aware, but it is so well built that a few tweaks are enough to make it generate a pretty usable PDF.
Here goes a step-by-step description of how I did it:
Download the software on the releases page;
Generate your traditional HTML docs in your preferred way (Ant, Maven, command-line javadoc - your choice);
The GUI is nice, but adding all files manually can be cumbersome, so just create a .book file with Document Type set to "Web Page", add one of the HTML files from your generated javadoc's root folder (e.g., overview-summary.html, anyone will do, it's just for reference on step 5). On the Output tab select the PDF format and set a name for it, and add other options to your heart's content (logos, colors, lots of cool stuff here). Save this project (say, myjavadocpdf.book) and close the GUI
Generate a list of all HTML files in your javadoc. I did it with Cygwin's find command (my DOS/cmd shell days are long over), but you can do anything you want, as long as you get a file list. In my case a find . | grep html$ | sort -r > files.txt did the trick;
For Windows users, dir /s/b *.html > files.txt should do the same (but keep in mind you may have to replace \s with /s if they appear like so on the next step).
Open the .book file generated on step 3 in your favorite pure text editor (as a programmer you should have strong opinions on that, so will keep my opinions to myself - NOT ;-) ) and append the list generated on step 4 to this .book file (it keeps the list of files at the end, making life really easy). Don't forget to fix the relative paths, if needed with a global search/replace (that's why you needed at least one file added on step 3 - to see which file path pattern htmldoc expects);
Now you should sort the files in a convenient order. I put my overview first, then package descriptions and each class, then the full index, and everything else at the end. Remember that any file you delete will become an external (hence broken) link, so choose wisely;
Save your .book file and re-open it on HTMLDOC. Voila: all files added and sorted. Click on generate. That's it!
You may want to fiddle with images (hint: use HTML width/height, not style/css). In the end, the resulting file is surprisingly good: nice looking and fully navigable for internal and external links. Impressive when you consider that the tool is not Java(Doc) aware at all...
EDIT: software is now free from original author; updated links, thank you @mohammed