biological-neural-networkneuron-simulatorneuromllems

Where does jNeuroML put LEMS commands in generated NEURON .MOD/NMODL?


How do the following tags in LEMS get mapped into NEURON .MOD/NMODL files:

<OnEvent>
   <StateAssignment .. />
</OnEvent>

<OnCondition ... >
   <StateAssignment ... >
</OnCondition>

<DerivedVariable .. />
<ConditionalDerivedVariable .. />
<TimeDerivative .. />

Solution

  • The LEMS tags are mapped to NEURON MOD as follows:

    Notes:

    See: In NEURON .MOD files what is the order of operations of the sections?