amazon-emrdistcps3distcp

How to EMR S3DistCp groupBy properly?

I am using aws .net sdk to run a s3distcp job to EMR to concatenate all files in a folder with --groupBy arg. But whatever "groupBy" arg I have tried, it failed all the time or just copy the files without concatenating like if no --groupBy specified in the arg list.

The files in the folder is spark saveAsTextFiles named like below:

part-0000
part-0001
part-0002
...
...

step.HadoopJarStep = new HadoopJarStepConfig
            {
                Jar = "/usr/share/aws/emr/s3-dist-cp/lib/s3-dist-cp.jar",
                Args = new List<string>
                {
                    "--s3Endpoint=s3-eu-west-1.amazonaws.com",
                    "--src=s3://foo/spark/result/bar" ,
                    "--dest=s3://foo/spark/result-merged/bar",
                    "--groupBy=(part.*)",
                    "--targetSize=256"

                }
            };
Solution

  • After all the struggling with this whole day, in the end I got it worked with the groupKey arg below:

    --groupBy=.*part.*(\w+)

    But even if I add --targetSize=1024 to args s3distcp produced 2,5MB - 3MB files. Does anyone have any idea about it?

    ** *UPDATE * **

    Here is the groupBy clause which is concatenating all the files into one file, in their own folder:

    .*/(\\w+)/.*

    The last "/" is so important here --source="s3://foo/spark/result/"

    There are some folders in "result" folder:

    s3://foo/spark/result/foo
s3://foo/spark/result/bar
s3://foo/spark/result/lorem
s3://foo/spark/result/ipsum

    and in each folder above there are hundreds of files like:

    part-0000
part-0001
part-0002

    .*/(\\w+)/.* this group by clause group every file in every folder so in the end you got one file for each folder with the folder name

    s3://foo/spark/result-merged/foo/foo -> File
s3://foo/spark/result-merged/bar/bar -> File
s3://foo/spark/result-merged/lorem/lorem -> File
s3://foo/spark/result-merged/ipsum/ipsum -> File

    So, this is the final working command for me:

    s3-dist-cp --src s3://foo/spark/result/  --dest s3://foo/spark/results-merged --groupBy '.*/(\\w+)/.*' --targetSize 1024

    Thanks.