Here is an example code:
df <- rbind(matrix(rep(sample(5),2),5,2),matrix(sample(10),5,2))
model_color <- unique(as.vector(df))
names(model_color) <- model_color
brand <- unique(as.vector(df))
names(brand) <- brand
chordDiagram(data.frame(df), order = names(brand), grid.col = model_color, directional = 0)
circos.clear()
How can I "mask" the self-links? I would like to remove them keeping the space empty (picture on the right).
This seems to work...
transparency <- ifelse(df[,1]==df[,2],1,0.5)
chordDiagram(data.frame(df), order = names(brand),
transparency=transparency,grid.col = model_color, directional = 0)