pythongaussianconfidence-intervalgpy

Get confidence limits from Gaussian Process model in Python GPy

I calcualted a Gaussian Process model in Python using GPy:

ker0 = GPy.kern.Bias(input_dim=1,variance=1e-2)
...
m = GPy.models.GPRegression(x, y, ker0+ker2)

I can plot it with 

m.plot()
plt.show

and it visualizes the points, the spline and the confidence limits. Now I want to extract the parameters and the confidence limits to use the data in another plot. My question is, how can I access these data.

if I print m I get

Name : GP regression
Objective : 31.9566881665
Number of Parameters : 4
Number of Optimization Parameters : 4
Updates : True
Parameters:
  GP_regression.           |              value  |  constraints  |  priors
  sum.bias.variance        |  7.48802926977e-61  |      +ve      |
  sum.spline.variance      |     -2.99999065833  |   -3.0,-1.0   |
  sum.spline.c             |      19.8308670902  |   0.0,300.0   |
  Gaussian_noise.variance  |      50.2314402955  |      +ve      |

thx!

Solution

  • Try

    m.sum.bias.variance

    notice the m. at the beginning.