If I run this reprex, I get the required output:
``` r
library(UpSetR)
listInput <- list(one = c(1, 2, 3, 5, 7, 8, 11, 12, 13),
two = c(1, 2, 4, 5, 10),
three = c(1, 5, 6, 7, 8, 9, 10, 12, 13))
upset(fromList(listInput), order.by = "freq")
```
If I apply a colour, I get the following error.
``` r
library(UpSetR)
listInput <- list(one = c(1, 2, 3, 5, 7, 8, 11, 12, 13),
two = c(1, 2, 4, 5, 10),
three = c(1, 5, 6, 7, 8, 9, 10, 12, 13))
upset(fromList(listInput), order.by = "freq",
queries = list(list(query = intersects, params = list("one"), color = "orange", active = T)))
#> Error in eval(expr, envir, enclos): object 'freq' not found
```
I've looked at the colouring "example 5" in the vignettes, but can't spot my misstep.
Add a column of integers to the dataframe inputted into upset
.
library(UpSetR)
listInput <- list(one = c(1, 2, 3, 5, 7, 8, 11, 12, 13),
two = c(1, 2, 4, 5, 10),
three = c(1, 5, 6, 7, 8, 9, 10, 12, 13))
df <- fromList(listInput)
df$n <- sample(1:nrow(df))
upset(df, order.by = "freq",
queries = list(list(query = intersects,
params = list("one"),
color = "orange")))