I am getting error while installing JPype1 in my system. I am using Python 3.7. JPype1 is required as dependency for Jaydebeapi.
pip install Jpype1
Following are the error message:
Collecting jpype1
Using cached
https://files.pythonhosted.org/packages/c4/4b/60a3e63d51714d4d7ef1b1efdf84315d118a0a80a5b085bb52a7e2428cdc/JPype1-0.6.3.tar.gz
Building wheels for collected packages: jpype1
Running setup.py bdist_wheel for jpype1 ... error
Complete output from command /Users/citius/anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-install-1rreficl/jpype1/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-wheel-swsvni4l --python-tag cp36:
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-10.7-x86_64-3.6
creating build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jcollection.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_classpath.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jio.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_pykeywords.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jproxy.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_gui.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_darwin.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/nio.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_cygwin.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_properties.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_refdaemon.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jboxed.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/JClassUtil.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jvmfinder.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/imports.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_core.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_linux.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jarray.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jobject.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jclass.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_windows.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jwrapper.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jexception.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/reflect.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jpackage.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
creating build/lib.macosx-10.7-x86_64-3.6/jpype/awt
copying jpype/awt/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpype/awt
creating build/lib.macosx-10.7-x86_64-3.6/jpype/awt/event
copying jpype/awt/event/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpype/awt/event
copying jpype/awt/event/WindowAdapter.py -> build/lib.macosx-10.7-x86_64-3.6/jpype/awt/event
creating build/lib.macosx-10.7-x86_64-3.6/jpypex
copying jpypex/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex
creating build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
copying jpypex/swing/AbstractAction.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
copying jpypex/swing/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
copying jpypex/swing/pyutils.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
running build_ext
/private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-install-1rreficl/jpype1/setup.py:173: FeatureNotice: Turned ON Numpy support for fast Java array access
FeatureNotice)
building '_jpype' extension
creating build/temp.macosx-10.7-x86_64-3.6
creating build/temp.macosx-10.7-x86_64-3.6/native
creating build/temp.macosx-10.7-x86_64-3.6/native/python
creating build/temp.macosx-10.7-x86_64-3.6/native/common
gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Users/citius/anaconda3/include -arch x86_64 -I/Users/citius/anaconda3/include -arch x86_64 -DMACOSX=1 -DHAVE_NUMPY=1 -Inative/common/include -Inative/python/include -Inative/jni_include -I/Users/citius/anaconda3/lib/python3.6/site-packages/numpy/core/include -I/Users/citius/anaconda3/include/python3.6m -c native/python/jpype_python.cpp -o build/temp.macosx-10.7-x86_64-3.6/native/python/jpype_python.o -ggdb
In file included from /Users/citius/anaconda3/lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/include-fixed/syslimits.h:7:0,
from /Users/citius/anaconda3/lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/include-fixed/limits.h:34,
from /Users/citius/anaconda3/include/python3.6m/Python.h:11,
from native/python/include/jpype_python.h:23,
from native/python/jpype_python.cpp:19:
/Users/citius/anaconda3/lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/include-fixed/limits.h:168:61: fatal error: limits.h: No such file or directory
#include_next /* recurse down to the real one */
^
compilation terminated.
error: command 'gcc' failed with exit status 1
----------------------------------------
Failed building wheel for jpype1
Running setup.py clean for jpype1
Failed to build jpype1
Installing collected packages: jpype1
Running setup.py install for jpype1 ... error
Complete output from command /Users/citius/anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-install-1rreficl/jpype1/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-record-3pg5yd08/install-record.txt --single-version-externally-managed --compile:
running install
running build
running build_py
creating build
creating build/lib.macosx-10.7-x86_64-3.6
creating build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jcollection.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_classpath.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jio.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_pykeywords.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jproxy.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_gui.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_darwin.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/nio.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_cygwin.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_properties.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_refdaemon.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jboxed.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/JClassUtil.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jvmfinder.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/imports.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_core.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_linux.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jarray.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jobject.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jclass.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_windows.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jwrapper.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jexception.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/reflect.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
copying jpype/_jpackage.py -> build/lib.macosx-10.7-x86_64-3.6/jpype
creating build/lib.macosx-10.7-x86_64-3.6/jpype/awt
copying jpype/awt/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpype/awt
creating build/lib.macosx-10.7-x86_64-3.6/jpype/awt/event
copying jpype/awt/event/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpype/awt/event
copying jpype/awt/event/WindowAdapter.py -> build/lib.macosx-10.7-x86_64-3.6/jpype/awt/event
creating build/lib.macosx-10.7-x86_64-3.6/jpypex
copying jpypex/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex
creating build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
copying jpypex/swing/AbstractAction.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
copying jpypex/swing/__init__.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
copying jpypex/swing/pyutils.py -> build/lib.macosx-10.7-x86_64-3.6/jpypex/swing
running build_ext
/private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-install-1rreficl/jpype1/setup.py:173: FeatureNotice: Turned ON Numpy support for fast Java array access
FeatureNotice)
building '_jpype' extension
creating build/temp.macosx-10.7-x86_64-3.6
creating build/temp.macosx-10.7-x86_64-3.6/native
creating build/temp.macosx-10.7-x86_64-3.6/native/python
creating build/temp.macosx-10.7-x86_64-3.6/native/common
gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -I/Users/citius/anaconda3/include -arch x86_64 -I/Users/citius/anaconda3/include -arch x86_64 -DMACOSX=1 -DHAVE_NUMPY=1 -Inative/common/include -Inative/python/include -Inative/jni_include -I/Users/citius/anaconda3/lib/python3.6/site-packages/numpy/core/include -I/Users/citius/anaconda3/include/python3.6m -c native/python/jpype_python.cpp -o build/temp.macosx-10.7-x86_64-3.6/native/python/jpype_python.o -ggdb
In file included from /Users/citius/anaconda3/lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/include-fixed/syslimits.h:7:0,
from /Users/citius/anaconda3/lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/include-fixed/limits.h:34,
from /Users/citius/anaconda3/include/python3.6m/Python.h:11,
from native/python/include/jpype_python.h:23,
from native/python/jpype_python.cpp:19:
/Users/citius/anaconda3/lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/include-fixed/limits.h:168:61: fatal error: limits.h: No such file or directory
#include_next /* recurse down to the real one */
^
compilation terminated.
error: command 'gcc' failed with exit status 1
----------------------------------------
Command "/Users/citius/anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-install-1rreficl/jpype1/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-record-3pg5yd08/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /private/var/folders/kw/ykkdj1vn7qj_2hms02xmtz6h0000gn/T/pip-install-1rreficl/jpype1/
First install gcc using conda
conda install gcc
Then use binary installation for jpype1. Install it from the conda-forge software channel.
conda install -c conda-forge jpype1
It worked for me.
It also works for Python2.7