I am facing a problem now, unable to run any program in the cluster. It gives error.
OpenBLAS blas_thread_init: pthread_create: Resource temporarily unavailable
OpenBLAS blas_thread_init: RLIMIT_NPROC 64 current, 64 max
OpenBLAS blas_thread_init: pthread_create: Resource temporarily unavailable
OpenBLAS blas_thread_init: RLIMIT_NPROC 64 current, 64 max
OpenBLAS blas_thread_init: pthread_create: Resource temporarily unavailable
OpenBLAS blas_thread_init: RLIMIT_NPROC 64 current, 64 max
OpenBLAS blas_thread_init: pthread_create: Resource temporarily unavailable
OpenBLAS blas_thread_init: RLIMIT_NPROC 64 current, 64 max
Traceback (most recent call last):
File "hello-world.py", line 1, in <module>
from keras.models import Sequential
File "/home/amalli2s/anaconda3/lib/python3.6/site-packages/keras/__init__.py", line 3, in <module>
from . import utils
File "/home/amalli2s/anaconda3/lib/python3.6/site-packages/keras/utils/__init__.py", line 2, in <module>
from . import np_utils
File "/home/amalli2s/anaconda3/lib/python3.6/site-packages/keras/utils/np_utils.py", line 6, in <module>
import numpy as np
File "/home/amalli2s/.local/lib/python3.6/site-packages/numpy/__init__.py", line 142, in <module>
from . import add_newdocs
File "/home/amalli2s/.local/lib/python3.6/site-packages/numpy/add_newdocs.py", line 13, in <module>
from numpy.lib import add_newdoc
File "/home/amalli2s/.local/lib/python3.6/site-packages/numpy/lib/__init__.py", line 8, in <module>
from .type_check import *
File "/home/amalli2s/.local/lib/python3.6/site-packages/numpy/lib/type_check.py", line 11, in <module>
import numpy.core.numeric as _nx
File "/home/amalli2s/.local/lib/python3.6/site-packages/numpy/core/__init__.py", line 16, in <module>
from . import multiarray
SystemError: initialization of multiarray raised unreported exception
This problem, i assume to be same as this one Multiple instances of Python running simultaneously limited to 35
So according to the solution when I set
export OPENBLAS_NUM_THREADS=1
then I end up getting following error:
terminate called after throwing an instance of 'std::system_error'
what(): Resource temporarily unavailable
Aborted
Is there anybody else facing same issue or has idea on how to solve this ? Thank you.
EDIT: Ok, Seems like this happened because of some config restrictions the admins were trying to implement. Now it works again.
I had this problem running numpy on an ubuntu server. I got all of the following errors, depending on whether I tried to import numpy in a shell or running my django app:
I'm posting this answer since it drove me crazy. What helped for me was to add:
import os
os.environ['OPENBLAS_NUM_THREADS'] = '1'
before
import numpy as np
I guess the server had some limit for the amount of threads it allows(?). Hope it helps someone!