I've made a LDA topic model in R, using the textmineR package, it looks as follows.
## get textmineR dtm
dtm2 <- CreateDtm(doc_vec = dat2$fulltext, # character vector of documents
ngram_window = c(1, 2),
doc_names = dat2$names,
stopword_vec = c(stopwords::stopwords("da"), custom_stopwords),
lower = T, # lowercase - this is the default value
remove_punctuation = T, # punctuation - this is the default
remove_numbers = T, # numbers - this is the default
verbose = T,
cpus = 4)
dtm2 <- dtm2[, colSums(dtm2) > 2]
dtm2 <- dtm2[, str_length(colnames(dtm2)) > 2]
############################################################
## RUN & EXAMINE TOPIC MODEL
############################################################
# Draw quasi-random sample from the pc
set.seed(34838)
model2 <- FitLdaModel(dtm = dtm2,
k = 8,
iterations = 500,
burnin = 200,
alpha = 0.1,
beta = 0.05,
optimize_alpha = TRUE,
calc_likelihood = TRUE,
calc_coherence = TRUE,
calc_r2 = TRUE,
cpus = 4)
The questions are then:
1. Which function should i apply to get the perplexity scores in the textmineR package? I can't seem to find one.
2. how do i measure complexity scores for different numbers of topics(k)?
As asked: there's no way to calculate perplexity with textmineR
unless you explicitly program it yourself. TBH, I've never seen value of perplexity that you couldn't get with likelihood and coherence, so I didn't implement it.
However, the text2vec
package does have an implementation. See below for example:
library(textmineR)
# model ships with textmineR as example
m <- nih_sample_topic_model
# dtm ships with textmineR as example
d <- nih_sample_dtm
# get perplexity
p <- text2vec::perplexity(X = d,
topic_word_distribution = m$phi,
doc_topic_distribution = m$theta)