Putting together different base and documentation examples, I have managed to come up with this:
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2)
def objective(config, reporter):
for i in range(config['iterations']):
model = RandomForestClassifier(random_state=0, n_jobs=-1, max_depth=None, n_estimators= int(config['n_estimators']), min_samples_split=int(config['min_samples_split']), min_samples_leaf=int(config['min_samples_leaf']))
model.fit(X_train, y_train)
y_pred = model.predict(X_test)
# Feed the score back to tune?
reporter(precision=precision_score(y_test, y_pred, average='macro'))
space = {'n_estimators': (100,200),
'min_samples_split': (2, 10),
'min_samples_leaf': (1, 5)}
algo = BayesOptSearch(
space,
metric="precision",
mode="max",
utility_kwargs={
"kind": "ucb",
"kappa": 2.5,
"xi": 0.0
},
verbose=3
)
scheduler = AsyncHyperBandScheduler(metric="precision", mode="max")
config = {
"num_samples": 1000,
"config": {
"iterations": 10,
}
}
results = run(objective,
name="my_exp",
search_alg=algo,
scheduler=scheduler,
stop={"training_iteration": 400, "precision": 0.80},
resources_per_trial={"cpu":2, "gpu":0.5},
**config)
print(results.dataframe())
print("Best config: ", results.get_best_config(metric="precision"))
It runs and I am able to get a best configuration at the end of everything. However, my doubt mainly lies in the objective
function. Do I have that properly written? There are no samples that I could find
Follow up question:
num_samples
in the config object? Is it the number of samples it will extract from the overall training data for each trial?Tune now has native sklearn bindings: https://github.com/ray-project/tune-sklearn
Can you give that a shot instead?
To answer your original question, the objective function looks good; and num_samples
is the total number of hyperparameter configurations you want to try.
Also, you'll want to remove the forloop from your training function:
def objective(config, reporter):
model = RandomForestClassifier(random_state=0, n_jobs=-1, max_depth=None, n_estimators= int(config['n_estimators']), min_samples_split=int(config['min_samples_split']), min_samples_leaf=int(config['min_samples_leaf']))
model.fit(X_train, y_train)
y_pred = model.predict(X_test)
# Feed the score back to tune
reporter(precision=precision_score(y_test, y_pred, average='macro'))