I'm leaning petsc (3.13.1) on a Linux virtual machine. The compiler is mpich-3.2.1 compiled with gfortran.
While going through the tutorials I found the extensinos are .F90
,
the files did not work after I changed the ext to .f90
.
I added some rules for .f90
in the makefile, still, it did not work.
I'm wondering how to revise makefile for the .f90
extensions.
Test codes:
program test
#include <petsc/finclude/petscsys.h>
use petscsys
type(PetscInt) :: ierr
call PetscInitialize(PETSC_NULL_CHARACTER,ierr)
if (ierr .ne. 0) then
write(*,*) 'Unable to initialize PETSc'
stop
end if
call PetscFinalize(ierr)
end program test
saved as test_f90.f90
and test_F90.F90
the test_f90.f90 did not work
[cfd@localhost tutorial]$ make test_f90
mpif90 -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O -I/home/cfd/petsc-3.13.1/linux-gnu/include -I/home/cfd/petsc-3.13.1/include -L/home/cfd/petsc-3.13.1/linux-gnu/lib -Wl,-rpath,/home/cfd/petsc-3.13.1/linux-gnu/lib -o test_f90 test_f90.f90 -lpetsc -lm
Warning: test_f90.f90:3: Illegal preprocessor directive
test_f90.f90:6.14:
type(PetscInt) :: ierr
1
Error: Derived type 'petscint' at (1) is being used before it is defined
make: *** [test_f90] Error 1
while the test_F90.F90 passed
[cfd@localhost tutorial]$ make test_F90
mpif90 -fPIC -Wall -ffree-line-length-0 -Wno-unused-dummy-argument -g -O -I/home/cfd/petsc-3.13.1/linux-gnu/include -I/home/cfd/petsc-3.13.1/include -L/home/cfd/petsc-3.13.1/linux-gnu/lib -Wl,-rpath,/home/cfd/petsc-3.13.1/linux-gnu/lib -o test_F90 test_F90.F90 -lpetsc -lm
The makefile is revised from $PETSC_DIR/share/petsc/Makerfile.user
where the following rules are added
% : %.f90
$(LINK.F) -o $@ $^ $(LDLIBS)
%.o: %.f90
$(COMPILE.F) $(OUTPUT_OPTION) $<
the full makefile:
# -*- mode: makefile -*-
PETSc.pc := $(PETSC_DIR)/$(PETSC_ARCH)/lib/pkgconfig/PETSc.pc
PACKAGES := $(PETSc.pc)
CC := $(shell pkg-config --variable=ccompiler $(PACKAGES))
CXX := $(shell pkg-config --variable=cxxcompiler $(PACKAGES))
FC := $(shell pkg-config --variable=fcompiler $(PACKAGES))
CFLAGS_OTHER := $(shell pkg-config --cflags-only-other $(PACKAGES))
CFLAGS := $(shell pkg-config --variable=cflags_extra $(PACKAGES)) $(CFLAGS_OTHER)
CXXFLAGS := $(shell pkg-config --variable=cxxflags_extra $(PACKAGES)) $(CFLAGS_OTHER)
FFLAGS := $(shell pkg-config --variable=fflags_extra $(PACKAGES))
CPPFLAGS := $(shell pkg-config --cflags-only-I $(PACKAGES))
LDFLAGS := $(shell pkg-config --libs-only-L --libs-only-other $(PACKAGES))
LDFLAGS += $(patsubst -L%, $(shell pkg-config --variable=ldflag_rpath $(PACKAGES))%, $(shell pkg-config --libs-only-L $(PACKAGES)))
LDLIBS := $(shell pkg-config --libs-only-l $(PACKAGES)) -lm
print:
@echo CC=$(CC)
@echo CXX=$(CXX)
@echo FC=$(FC)
@echo CFLAGS=$(CFLAGS)
@echo CXXFLAGS=$(CXXFLAGS)
@echo FFLAGS=$(FFLAGS)
@echo CPPFLAGS=$(CPPFLAGS)
@echo LDFLAGS=$(LDFLAGS)
@echo LDLIBS=$(LDLIBS)
% : %.f90
$(LINK.F) -o $@ $^ $(LDLIBS)
%.o: %.f90
$(COMPILE.F) $(OUTPUT_OPTION) $<
% : %.F90
$(LINK.F) -o $@ $^ $(LDLIBS)
%.o: %.F90
$(COMPILE.F) $(OUTPUT_OPTION) $<
% : %.c
$(LINK.c) -o $@ $^ $(LDLIBS)
%.o: %.c
$(COMPILE.cc) $(OUTPUT_OPTION) $<
% : %.cxx
$(LINK.cc) -o $@ $^ $(LDLIBS)
%.o: %.cxx
$(COMPILE.cc) $(OUTPUT_OPTION) $<
Thanks for Mark and evets.
I fix it by adding the -cpp
flag to FFLAGS
after checking the preprocessing part of
the manual https://linux.die.net/man/1/gfortran
The makefile revised part:
FFLAGS += -cpp
% : %.f90
$(LINK.F) -o $@ $^ $(LDLIBS)
%.o: %.f90
$(COMPILE.F) $(FFLAGS) $(OUTPUT_OPTION) $<