I am displaying an image of a molecule using IPython.display in Jupyter.
The resolution of the image is quite low. Is there a way to specify the width and height of the displayed image and its resolution? I googled it and could not find anything. All I need is something like this:
display(moleSmilemol, format='svg', width=1000, height=1000)
Any pointers would be appreciated.
Update: I could add custom css, which will blow up the picture that was generate, but it is still low quality. I am interested increasing the quality of the picture and its size too. So something deeper than CSS is needed.
Try changing the variables in the rdkit.Chem.Draw.IPythonConsole
module:
from rdkit.Chem.Draw import IPythonConsole
IPythonConsole.molSize = (800, 800) # Change image size
IPythonConsole.ipython_useSVG = True # Change output to SVG
mol = Chem.MolFromSmiles('N#Cc1cccc(-c2nc(-c3cccnc3)no2)c1')
display(mol)
Otherwise, you need to use the rdMolDraw2D
module to create the drawings yourself with the parameters you require.