I am trying to use vroom::vroom_write to write a tibble to a text file. Within my R session, I see that the third column of my tibble has some zeros. When I examine the text file, I see that some of zeros are written as negative zero.
Here is example code to reproduce what I see.
library(magrittr)
set.seed(2022-06-07)
dat <- tibble::tibble(rand = rnorm(n = 10, mean = 0, sd = 1), indicator = rbinom(n = 10, size = 1, prob = 0.5), product = rand * indicator)
dat %>%
vroom::vroom_write(file = "out.txt")
Here is dat in my R session.
> dat
# A tibble: 10 × 3
rand indicator product
<dbl> <int> <dbl>
1 -0.851 1 -0.851
2 0.274 1 0.274
3 -0.179 1 -0.179
4 -0.257 0 0
5 1.33 0 0
6 -1.85 0 0
7 0.191 1 0.191
8 0.441 0 0
9 -1.46 0 0
10 -0.754 0 0
>
Here is the file out.txt.
rand indicator product
-0.8514459712815987 1 -0.8514459712815987
0.2738400972346478 1 0.2738400972346478
-0.17889364131136923 1 -0.17889364131136923
-0.25728795761508944 0 -0
1.3288498659722705 0 0
-1.847720986710459 0 -0
0.19140525644162554 1 0.19140525644162554
0.44121526714638787 0 0
-1.4602030403350934 0 -0
-0.7538551785550484 0 -0
Is this a known problem for vroom? Is there a solution? I'd like to avoid having negative zeros in my file out.txt.
Here is my R session info.
devtools::session_info()
─ Session info ───────────────────────────────────────────────────────────────────────────────────────
setting value
version R version 4.2.0 (2022-04-22)
os Ubuntu 18.04.5 LTS
system x86_64, linux-gnu
ui RStudio
language (EN)
collate en_US.UTF-8
ctype en_US.UTF-8
tz America/Detroit
date 2022-06-07
rstudio 2022.02.2+485 Prairie Trillium (server)
pandoc 2.17.1.1 @ /usr/lib/rstudio-server/bin/quarto/bin/ (via rmarkdown)
─ Packages ───────────────────────────────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
assertthat 0.2.1 2019-03-21 [3] CRAN (R 4.0.3)
bit 4.0.4 2020-08-04 [3] CRAN (R 4.0.3)
bit64 4.0.5 2020-08-30 [3] CRAN (R 4.0.3)
brio 1.1.3 2021-11-30 [1] CRAN (R 4.1.2)
cachem 1.0.6 2021-08-19 [3] CRAN (R 4.1.1)
callr 3.7.0 2021-04-20 [3] CRAN (R 4.0.5)
cli 3.3.0 2022-04-25 [1] CRAN (R 4.2.0)
colorspace 2.0-3 2022-02-21 [3] CRAN (R 4.2.0)
crayon 1.5.1 2022-03-26 [1] CRAN (R 4.2.0)
data.table 1.14.2 2021-09-27 [1] CRAN (R 4.1.2)
DBI 1.1.2 2021-12-20 [3] CRAN (R 4.2.0)
desc 1.4.1 2022-03-06 [3] CRAN (R 4.2.0)
devtools 2.4.3 2021-11-30 [1] CRAN (R 4.1.2)
digest 0.6.29 2021-12-01 [1] CRAN (R 4.1.2)
distributional 0.3.0 2022-01-05 [1] CRAN (R 4.2.0)
dplyr 1.0.9 2022-04-28 [1] CRAN (R 4.2.0)
ellipsis 0.3.2 2021-04-29 [3] CRAN (R 4.0.5)
evaluate 0.15 2022-02-18 [3] CRAN (R 4.2.0)
fansi 1.0.3 2022-03-24 [3] CRAN (R 4.2.0)
farver 2.1.0 2021-02-28 [3] CRAN (R 4.0.5)
fastmap 1.1.0 2021-01-25 [3] CRAN (R 4.0.3)
fs 1.5.2 2021-12-08 [1] CRAN (R 4.2.0)
generics 0.1.2 2022-01-31 [3] CRAN (R 4.2.0)
ggdist 3.1.1 2022-02-27 [1] CRAN (R 4.2.0)
ggplot2 3.3.6 2022-05-03 [3] CRAN (R 4.2.0)
glue 1.6.2 2022-02-24 [1] CRAN (R 4.2.0)
gtable 0.3.0 2019-03-25 [3] CRAN (R 4.0.3)
htmltools 0.5.2 2021-08-25 [3] CRAN (R 4.1.1)
htmlwidgets 1.5.4 2021-09-08 [3] CRAN (R 4.1.1)
jmuOutlier 2.2 2019-08-05 [1] CRAN (R 4.2.0)
knitr 1.39 2022-04-26 [3] CRAN (R 4.2.0)
lifecycle 1.0.1 2021-09-24 [3] CRAN (R 4.1.1)
magrittr * 2.0.3 2022-03-30 [1] CRAN (R 4.2.0)
memoise 2.0.1 2021-11-26 [1] CRAN (R 4.1.2)
munsell 0.5.0 2018-06-12 [3] CRAN (R 4.0.3)
pillar 1.7.0 2022-02-01 [3] CRAN (R 4.2.0)
pkgbuild 1.3.1 2021-12-20 [1] CRAN (R 4.2.0)
pkgconfig 2.0.3 2019-09-22 [3] CRAN (R 4.0.3)
pkgload 1.2.4 2021-11-30 [1] CRAN (R 4.1.2)
prettyunits 1.1.1 2020-01-24 [3] CRAN (R 4.0.3)
processx 3.5.3 2022-03-25 [3] CRAN (R 4.2.0)
ps 1.7.0 2022-04-23 [3] CRAN (R 4.2.0)
purrr 0.3.4 2020-04-17 [3] CRAN (R 4.0.3)
R6 2.5.1 2021-08-19 [3] CRAN (R 4.1.1)
remotes 2.4.2 2021-11-30 [1] CRAN (R 4.1.2)
rlang 1.0.2 2022-03-04 [1] CRAN (R 4.2.0)
rmarkdown 2.14 2022-04-25 [1] CRAN (R 4.2.0)
rprojroot 2.0.3 2022-04-02 [3] CRAN (R 4.2.0)
rstudioapi 0.13 2020-11-12 [3] CRAN (R 4.0.3)
scales 1.2.0 2022-04-13 [3] CRAN (R 4.2.0)
sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.1.2)
testthat 3.1.4 2022-04-26 [1] CRAN (R 4.2.0)
tibble 3.1.7 2022-05-03 [1] CRAN (R 4.2.0)
tidyselect 1.1.2 2022-02-21 [3] CRAN (R 4.2.0)
tzdb 0.3.0 2022-03-28 [3] CRAN (R 4.2.0)
usethis 2.1.6 2022-05-25 [1] CRAN (R 4.2.0)
utf8 1.2.2 2021-07-24 [3] CRAN (R 4.1.1)
vctrs 0.4.1 2022-04-13 [1] CRAN (R 4.2.0)
vroom 1.5.7.9000 2022-05-22 [1] Github (r-lib/vroom@2218ba0)
withr 2.5.0 2022-03-03 [1] CRAN (R 4.2.0)
xfun 0.31 2022-05-10 [1] CRAN (R 4.2.0)
yaml 2.3.5 2022-02-21 [3] CRAN (R 4.2.0)
[1] /net/mulan/home/fredboe/R/x86_64-pc-linux-gnu-library/4.0
[2] /usr/local/lib/R/site-library
[3] /net/mario/cluster/lib/R/site-library-bionic-40
[4] /usr/lib/R/site-library
[5] /usr/lib/R/library
──────────────────────────────────────────────────────────────────────────────────────────────────────
>
This is likely a precision issue; before you write the file, you might try to replace values that are "near" 0 with 0, using near()
dat <- dat %>% mutate(product = if_else(near(product,0),0,product))