Here's my Dockerfile:
# v2023.8.21
# =================================
# Micromamba
# =================================
FROM mambaorg/micromamba:1.4.9
ARG ENV_NAME
SHELL ["bash"]
WORKDIR /tmp/
# Data
RUN mkdir -p /volumes/
RUN mkdir -p /volumes/input
RUN mkdir -p /volumes/output
RUN mkdir -p /volumes/database
# Retrieve VEBA repository
RUN mkdir -p veba/
COPY --chown=$MAMBA_USER:$MAMBA_USER ./install/ veba/install/
COPY --chown=$MAMBA_USER:$MAMBA_USER ./src/ veba/src/
COPY --chown=$MAMBA_USER:$MAMBA_USER ./VERSION veba/VERSION
COPY --chown=$MAMBA_USER:$MAMBA_USER ./LICENSE veba/LICENSE
RUN micromamba install -y -n base -f veba/install/environments/${ENV_NAME}.yml && \
micromamba clean -a -y -f
However, I'm unable to create the /volumes/ directories because of permission issues.
How can I update the permissions so I can edit the root directory?
If you mean that lines like this are failing:
RUN mkdir -p /volumes/
Then you can switch the user running the commands with the USER directive, and the switch back to the original user when you're done:
# switch to root to create /volumes hierarchy
USER root
RUN mkdir -p /volumes
RUN mkdir -p /volumes/input
RUN mkdir -p /volumes/output
RUN mkdir -p /volumes/database
# switch back to mambauser
USER mambauser