I'm have a logistic regression model predicting interest (0=no interest, 1=interest) with randomised experimental condition (0=control, 1=experimental), sex, sex:condition interaction, and several other covariates included as predictors.
Using marginaleffects
package in R, I need to work out two things:
Here is the logistic regression model:
model <- glm(data=dt, formula=interest ~ condition*sex + other_covariates,
family=binomial(link="logit"))
I have successfully completed objective (1) — calculating the sex-specific marginal risk ratios (RRmen & RRwomen) — using the following:
marginaleffects::avg_comparisons(model, comparison="ratio",
variables="condition",by="sex")
However, I can't seem to figure out how to calculate (2) — the ratio of risk ratios (RRmen / RRwomen) — alongside its associated confidence intervals.
Any help would be greatly appreciated. If this is more straightforward to do using another package like emmeans
I'm also happy to use that. Thanks!
You can use the hypothesis
argument to conduct (non)linear tests on any quantity generated by the marginaleffects
package. See the very detailed tutorial here:
https://marginaleffects.com/vignettes/hypothesis.html
You do not provide a minimal working example, so I can't provide a fully working solution, but your code could end up looking like this:
avg_comparisons(model,
comparison="ratio",
variables="condition",
by="sex",
hypothesis = "b1 / b2 = 1")
Note that I have only added the last argument, telling marginaleffects
that we want to check if the ratio of the first estimate to the second is different from 1. When I say "first" estimate, I mean the first row in the output of the same command if you just remove the hypothesis
argument.