Am trying to replace the _
in the regression table in gtsummary with Ref
. My old code does not work as it used to be. I will appreciate assistance....
library(gtsummary)
mod1 <- glm(response ~ trt + age + grade, trial, family = binomial)
t1 <- tbl_regression(mod1, exponentiate = TRUE)
# This code would do the trick but does not currently does not. Using `gtsummary_2.0.3`
t1 |>
modify_table_styling(
rows = reference_row %in% TRUE,
missing_symbol = "Ref"
)
It looks like you need to specify the columns you want to apply this change to using the modify_table_styling(columns)
argument. Example below!
library(gtsummary)
mod1 <- glm(response ~ trt + age + grade, trial, family = binomial)
t1 <- tbl_regression(mod1, exponentiate = TRUE)
# This code would do the trick but does not currently does not. Using `gtsummary_2.0.3`
t1 |>
modify_table_styling(
columns = c(estimate, conf.low),
rows = reference_row %in% TRUE,
missing_symbol = "Ref"
) |>
bold_labels() |>
as_kable() # convert to kable to display on SO
Characteristic | OR | 95% CI | p-value |
---|---|---|---|
Chemotherapy Treatment | |||
Drug A | Ref | Ref | |
Drug B | 1.13 | 0.60, 2.13 | 0.7 |
Age | 1.02 | 1.00, 1.04 | 0.10 |
Grade | |||
I | Ref | Ref | |
II | 0.85 | 0.39, 1.85 | 0.7 |
III | 1.01 | 0.47, 2.15 | >0.9 |
Created on 2024-11-09 with reprex v2.1.1