I am a bit curious on how the merge info in Subversion is used, and what kind of problems one can run into if the merge info is incorrect?
For example, I have branched branch1 and branch2 from trunk. I also have a subbranch1 and a subbranch2 originating from branch1. Consider I've done some development in branch2, and then reintegrated it back to trunk using svn merge --reintegrate ^/branch2. I then wanted to add these changes to subbranch1 as well (pulling them from trunk) and mistakenly used command, svn merge --reintegrate ^/trunk (thus adding the --reintegrate flag to the merge command here too, even though subbranch1 is not an immediate ancestor of trunk).
What problems can this cause in the future?
This answer is deprecated. Please use Subversion >= 1.6.
You're branching approach is dangerous in general, but because of the accident it's even worse.
You'll get much problems when reintraging all the branches.
You cannot trust the three-way-comparsion anymore, you have to check each change manually!
See What mother never told you about svn branching and merging for more information.
P.S. I had to fix something like this once. Since then we use bunny hopping (see link).