image-processingmedicalimage-registration

How to use ANTS registration tool?

I am working medical image segmentation. I have T1-weighted MRIs of 120 patients with their corresponding label volumes (altogether 240 volumes). I have not worked with image-registration. I installed ANTS but I do not know how to apply registration on these MRIs. I am confused with few questions:

  1. Which patient should be considered as fixed and which one moving? What is the criteria for such choosing?
  2. Since this is segmentation task, the ground truth images should be registered as well? if yes, how?
Solution

  • I could find out the solution from the ANTS wiki page.